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Fundamental Bioinformatician Course in Python

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About Course

Fundamental Bioinformatician Course in Python Allows You To Develop The Basic Bioinformatician & Programming Skills in Python

Being a Bioinformatician means you’ve to learn how to retrieve and analyze biological data in the most efficient way, to learn how to align & analyze biological sequences to predict the evolutionary histories between them, to find out the conserved patterns, to learn how to predict coding regions or genes from a raw nucleotide sequence, and much more.

To efficiently deal with huge genomic and proteomic data often requires writing short scripts or patches of code to computationally analyze the biological datasets, rather than comparing and analyzing such huge datasets manually. Hence, the major part of Bioinformatics involves computationally analyzing biological datasets.

The simple syntax and high-level data structures of Python, make it easier for nonprofessional programmers such as computational biologists to develop programming skills, enabling them to interact with data programmatically and eventually develop code on their own.

In this course you’ll learn the very basics of most commonly utilized biological databases, how to find conserved and variable regions within sequence alignments & analysis and do evolutionary & phylogenetic analysis. You’ll also be able to learn various concepts related to how to write your first script, Python data structures such as lists, strings, dictionaries and more. Along with, how to read/write Bioinformatics files, work with loops and how to control the flow of your program and script.

Joining and learning from the Fundamental Bioinformatician Course in Python can enhance your biological career by learning through various useful & informative pre-recorded lectures on Bioinformatics tools, databases, servers and biological programming languages.

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What Will You Learn?

  • Bioinformatics Databases
  • Bioinformatics File Formats
  • Protein Databases & Analysis
  • Sequence Alignment & Analysis
  • Phylogenetic Analysis
  • Secondary Structure Prediction
  • Python

Course Content

Bioinformatics Databases

  • Introduction to National Center of Biotechnology Information (NCBI)
    18:02
  • Sequence Analysis
    17:59
  • Sequence Retrieval from NCBI
    16:17
  • PubMed Central & ENTREZ
    11:07
  • GenBank: Nucleotide Database on NCBI
    06:50
  • FASTA vs GenBank
    18:26
  • Gene Database: A Comprehensive Gene Database
    30:21
  • NCBI Genomes & NCBI Assembly: Retrieval of Genomes
    36:14
  • RefSeq Database: Retrieval of Single Reference Sequences
    11:16
  • BLAST Database Searching
    25:37
  • Introduction to UCSC Genome Browser & SARS-CoV2 Viral Genome
    13:40
  • Retrieve an Entire Genome & Retrieval of SARSCoV-2 Viral Genome
    09:41
  • Retrieval of Genomic Data & Annotation of SARSCoV-2 Viral Genome
    05:30
  • Introduction to ENSEMBL
    07:50
  • Retrieval of a Gene-Protein-Chromosomal Region
    18:02
  • Introduction to Phytozome
    09:39
  • Interpret Plant Genome Records
    09:07
  • Download an Entire Plant Genome & Proteome
    26:41

Bioinformatics File Formats

Protein Databases & Analysis

Sequence Alignment & Analysis

Phylogenetic Analysis

Secondary Structure Prediction

Python

Exercise

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3 years ago
very nice app

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